A tool collection for searching, building and aligning protein sequences.
HMMER is an implementation of the profile hidden Markov models that allows you to find protein sequences homologs in various databases. HMMER is used for searching sequence databases for homologs of protein sequences, and for making protein sequence alignments. It implements methods using probabilistic models called profile hidden Markov models (profile HMMs).
HMMER aims to be significantly accurate and able to detect remote homologs because of the strength of its underlying mathematical models.
Operating system:Windows XP / 7 / 8 / 8 64 bit
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